Učni načrt predmeta

Predmet:
Izbrana poglavja iz biotehnologije
Course:
Selected topics on Biotechnology
Študijski program in stopnja /
Study programme and level		 Študijska smer /
Study field		 Letnik /
Academic year		 Semester /
Semester
Ekotehnologije, 3. stopnja / 1 1
Ecotehnologies, 3rd cycle / 1 1
Vrsta predmeta / Course type
Izbirni
Univerzitetna koda predmeta / University course code:
EKO3-751
Predavanja
Lectures		 Seminar
Seminar		 Vaje
Tutorial		 Klinične vaje
work		 Druge oblike
študija		 Samost. delo
Individ. work		 ECTS
15 15 15 105 5

*Navedena porazdelitev ur velja, če je vpisanih vsaj 15 študentov. Drugače se obseg izvedbe kontaktnih ur sorazmerno zmanjša in prenese v samostojno delo. / This distribution of hours is valid if at least 15 students are enrolled. Otherwise the contact hours are linearly reduced and transfered to individual work.

Nosilec predmeta / Course leader:
doc. dr. David Dobnik
Sodelavci / Lecturers:
prof. dr. Maja Ravnikar
Jeziki / Languages:
Predavanja / Lectures:
angleščina, slovenščina / English, Slovenian
Vaje / Tutorial:
Pogoji za vključitev v delo oz. za opravljanje študijskih obveznosti:
Prerequisites:

Zaključen študij druge stopnje ustrezne (naravoslovne ali tehniške) smeri ali zaključen študij drugih smeri z dokazanim poznavanjem osnov področja predmeta (pisna dokazila, pogovor).

Completed second level studies in natural sciences or engineering or completed second level studies in other fields with proven knowledge of fundamentals in the field of this course (certificates, interview).

Vsebina:
Content (Syllabus outline):

- Teoretične osnove izbirnih poglavij biotehnologije
- Specialna področja biotehnologije, kot so področje rastlinskih tkivnih kultur, gensko spremenjenih organizmov, gensko zdravljenje, biologija, epidemiologija in diagnostika mikroorganizmov, okolju prijazne metode eliminacije mikroorganizmov, presoje tveganj itd.
- Delo na primerih

- Theoretical basis of selected topics on biotechnology
- Special fields of biotechnology, like plant tissue cultures, genetically modified organisms, gene therapy, detection of microorganisms, risk assessment etc.
- Case studies

Temeljna literatura in viri / Readings:

Pregledni članki, izbor v tekočem letu/ Review articles, chosen each year specifically

Cilji in kompetence:
Objectives and competences:

Znanje in razumevanje:
Samostojno reševanje problemov, povezanih s tematiko predmeta, kar vključuje:
- načrtovanje pristopa dela,
- povezovanje različnih pristopov raziskovanja, povezanih z biotehnologijo,
- vrednotenje dobljenih rezultatov,
- povezovanje pridobljenega znanja z delom na doktorskem delu.

Knowledge and understanding:
Independent problem solving in case studies relating to the topics of the course, by planning appropriate work approaches, connecting different research approaches, evaluation of results and by implementation of knowledge from work on PhD thesis.

Predvideni študijski rezultati:
Intendeded learning outcomes:

- Poznavanje izbranega področja biotehnologije na konkretnih primerih
- Povezovanje izbranega področja biotehnologije neposredno z vsebino doktorske naloge

Knowledge on the selected field of biotechnology based on specific cases related to directions of student's PhD thesis.

Metode poučevanja in učenja:
Learning and teaching methods:

V okviru predavanj, ki bodo potekala interaktivno v povezavi profesor- študent, bo poudarek na diskusiji predpripravljenih tematik ter samostojnem delu študenta.

Emphasis will be on interaction between professor and student(s) through lectures, which will be based on discussions on pre-prepared topics and student individual work.

Načini ocenjevanja:
Delež v % / Weight in %
Assesment:
Projekt – delo na primeru
100
Project – case study
Reference nosilca / Lecturer's references:
1. DOBNIK, David, KOGOVŠEK, Polona, JAKOMIN, Tjaša, KOŠIR, Nejc, TUŠEK-ŽNIDARIČ, Magda, LESKOVEC, Maja, KAMINSKY, Stephen M., MOSTROM, Janet, LEE, Hyunmi, RAVNIKAR, Maja. Accurate quantification and characterization of adeno-associated viral vectors. Frontiers in microbiology. 2019, vol. 10, str. 1-13. ISSN 1664-302X. https://www.frontiersin.org/articles/10.3389/fmicb.2019.01570/full, DOI: 10.3389/fmicb.2019.01570. [COBISS.SI-ID 5125199]
2. BOGOŽALEC KOŠIR, Alexandra, SPILSBERG, Bjørn, HOLST-JENSEN, Arne, ŽEL, Jana, DOBNIK, David. Development and inter-laboratory assessment of droplet digital PCR assays for multiplex quantification of 15 genetically modified soybean lines. Scientific reports. 2017, vol. 7, str. 1-11. ISSN 2045-2322. https://www.nature.com/articles/s41598-017-09377-w.pdf
3. DOBNIK, David, DEMŠAR, Tina, HUBER, Ingrid, GERDES, Lars, BROEDERS, Sylvia, ROOSENS, Nancy, DEBODE, Frédéric, BERBEN, Gilbert, ŽEL, Jana. Inter-laboratory analysis of selected genetically modified plant reference materials with digital PCR. Analytical and bioanalytical chemistry. 2018, vol. 410, iss. 1, str. 211-221
4. KEŽAR, Andreja, KAVČIČ, Luka, PÓLAK, Martin, NOVÁČEK, Jiři, GUTIÉRREZ-AGUIRRE, Ion, TUŠEK-ŽNIDARIČ, Magda, COLL RIUS, Anna, STARE, Katja, GRUDEN, Kristina, RAVNIKAR, Maja, PAHOVNIK, David, ŽAGAR, Ema, MERZEL, Franci, ANDERLUH, Gregor, PODOBNIK, Marjetka. Structural basis for the multitasking nature of the potato virus Y coat protein. Science advances. 2019, vol. 5, no. 7, str. 1-13, ilustr. ISSN 2375-2548. https://advances.sciencemag.org/content/5/7/eaaw3808, DOI: 10.1126/sciadv.aaw3808. [COBISS.SI-ID 5135183]
5. PECMAN, Anja, KUTNJAK, Denis, MEHLE, Nataša, TUŠEK-ŽNIDARIČ, Magda, GUTIÉRREZ-AGUIRRE, Ion, PIRNAT, Patricija, ADAMS, Ian, BOONHAM, Neil, RAVNIKAR, Maja. High-throughput sequencing facilitates characterisation of a ʺforgottenʺ plant virus : the case of a henbane mosaic virus infecting tomato. Frontiers in microbiology. 2018, vol. 9, str. 1-11. ISSN 1664-302X. https://www.frontiersin.org/articles/10.3389/fmicb.2018.02739/abstract, DOI: 10.3389/fmicb.2018.02739. [COBISS.SI-ID 4877391]